@prefix np: . @prefix owl: . @prefix rdf: . @prefix rdfs: . @prefix prov: . @prefix xsd: . @prefix sio: . @prefix ncit: . @prefix chear: . @prefix uberon: . @prefix pr: . @prefix hasco: . @prefix uo: . @prefix cst: . @prefix obo: . @prefix hp: . @prefix dron: . @prefix chebi: . @prefix db: . @prefix civic-kb: . @prefix uniprot: . @prefix doid: . @prefix efo: . civic-kb:head-explicit_entry { civic-kb:nanoPub-explicit_entry rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-explicit_entry ; np:hasProvenance civic-kb:provenance-explicit_entry ; np:hasPublicationInfo civic-kb:pubInfo-explicit_entry . } civic-kb:assertion-explicit_entry { civic-kb:Drugs rdf:type owl:Class ; rdfs:subClassOf sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string . civic-kb:Status rdf:type owl:Class ; rdfs:subClassOf sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string . civic-kb:Evidence_ID rdf:type owl:Class ; rdfs:subClassOf sio:Identifier ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string . civic-kb:Gene rdf:type owl:Class ; rdfs:subClassOf sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string . civic-kb:Variant rdf:type owl:Class ; rdfs:subClassOf ncit:C97927 ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string . civic-kb:Description rdf:type owl:Class ; rdfs:subClassOf sio:Description ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string . civic-kb:Disease rdf:type owl:Class ; rdfs:subClassOf sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string . civic-kb:Evidence_Level rdf:type owl:Class ; rdfs:subClassOf ncit:C25554 ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string . civic-kb:Evidence_Type rdf:type owl:Class ; rdfs:subClassOf sio:Attribute ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string . civic-kb:Evidence_Direction rdf:type owl:Class ; rdfs:subClassOf sio:Attribute ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string . civic-kb:Clinical_Significance rdf:type owl:Class ; rdfs:subClassOf sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string . civic-kb:Variant_Origin rdf:type owl:Class ; rdfs:subClassOf ncit:C42703 ; sio:isAttributeOf civic-kb:Variant ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating rdf:type owl:Class ; rdfs:subClassOf ncit:C77538 ; sio:isAttributeOf civic-kb:evidence ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string . } civic-kb:provenance-explicit_entry { civic-kb:assertion-explicit_entry prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence . civic-kb:Status prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-explicit_entry { civic-kb:nanoPub-explicit_entry prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs hasco:hasPosition "1"^^xsd:integer . civic-kb:Status hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant hasco:hasPosition "5"^^xsd:integer . civic-kb:Description hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-virtual_entry { civic-kb:nanoPub-virtual_entry rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-virtual_entry ; np:hasProvenance civic-kb:provenance-virtual_entry ; np:hasPublicationInfo civic-kb:pubInfo-virtual_entry . } civic-kb:assertion-virtual_entry { civic-kb:evidence rdf:type owl:Class ; rdfs:label "evidence" ; rdfs:subClassOf ncit:C43583 . } civic-kb:provenance-virtual_entry { civic-kb:assertion-virtual_entry prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-virtual_entry { civic-kb:nanoPub-virtual_entry prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:head-f2de55ebc606800db7a1cce823db37ed { civic-kb:nanoPub-f2de55ebc606800db7a1cce823db37ed rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-f2de55ebc606800db7a1cce823db37ed ; np:hasProvenance civic-kb:provenance-f2de55ebc606800db7a1cce823db37ed ; np:hasPublicationInfo civic-kb:pubInfo-f2de55ebc606800db7a1cce823db37ed . } civic-kb:assertion-f2de55ebc606800db7a1cce823db37ed { civic-kb:Drugs-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-f2de55ebc606800db7a1cce823db37ed ; rdf:type dron:00013025 ; rdf:type db:DB0007 ; rdfs:label "Trastuzumab"^^xsd:string ; sio:hasValue "Trastuzumab"^^xsd:string . civic-kb:Status-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1453"^^xsd:integer . civic-kb:Gene-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C21220 ; rdf:type uniprot:P42336 ; rdfs:label "PIK3CA Gene"^^xsd:string ; sio:hasValue "PIK3CA"^^xsd:string . civic-kb:Variant-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C98468 ; rdfs:label "E545K"^^xsd:string ; sio:hasValue "E545K"^^xsd:string . civic-kb:Description-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "PI3K mutant E545K was overexpressed in the trastuzumab sensitive HER2 BT474 breast cancer cell line, and significant resistance to trastuzumab was induced in comparison to control cells."^^xsd:string . civic-kb:Disease-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-f2de55ebc606800db7a1cce823db37ed ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-f2de55ebc606800db7a1cce823db37ed . } civic-kb:provenance-f2de55ebc606800db7a1cce823db37ed { civic-kb:assertion-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed . civic-kb:Status-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-f2de55ebc606800db7a1cce823db37ed { civic-kb:nanoPub-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-f2de55ebc606800db7a1cce823db37ed prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-df0c0ed01e02d0cc2a0cf620f1013910 { civic-kb:nanoPub-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-df0c0ed01e02d0cc2a0cf620f1013910 ; np:hasProvenance civic-kb:provenance-df0c0ed01e02d0cc2a0cf620f1013910 ; np:hasPublicationInfo civic-kb:pubInfo-df0c0ed01e02d0cc2a0cf620f1013910 . } civic-kb:assertion-df0c0ed01e02d0cc2a0cf620f1013910 { civic-kb:Drugs-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-df0c0ed01e02d0cc2a0cf620f1013910 ; rdf:type chebi:41774 ; rdf:type db:DB00675 ; rdfs:label "Tamoxifen"^^xsd:string ; sio:hasValue "Tamoxifen"^^xsd:string . civic-kb:Status-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "856"^^xsd:integer . civic-kb:Gene-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18021 ; rdf:type uniprot:P24385 ; rdfs:label "CCND1 Gene"^^xsd:string ; sio:hasValue "CCND1"^^xsd:string . civic-kb:Variant-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "The authors performed a tissue microarray analysis of 167 postmenopausal breast cancers that had been randomized to treatment with or without tamoxifen. ER +ve patients with high CCND1 tumor expression did not show any difference in survival between tamoxifen and no treatment."^^xsd:string . civic-kb:Disease-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-df0c0ed01e02d0cc2a0cf620f1013910 ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-df0c0ed01e02d0cc2a0cf620f1013910 . } civic-kb:provenance-df0c0ed01e02d0cc2a0cf620f1013910 { civic-kb:assertion-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 . civic-kb:Status-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-df0c0ed01e02d0cc2a0cf620f1013910 { civic-kb:nanoPub-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-df0c0ed01e02d0cc2a0cf620f1013910 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-a29fa6cc95bcd75adcf9b78fb7f8d065 { civic-kb:nanoPub-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-a29fa6cc95bcd75adcf9b78fb7f8d065 ; np:hasProvenance civic-kb:provenance-a29fa6cc95bcd75adcf9b78fb7f8d065 ; np:hasPublicationInfo civic-kb:pubInfo-a29fa6cc95bcd75adcf9b78fb7f8d065 . } civic-kb:assertion-a29fa6cc95bcd75adcf9b78fb7f8d065 { civic-kb:Drugs-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-a29fa6cc95bcd75adcf9b78fb7f8d065 ; sio:hasValue "FGF/VEGF Receptor Tyrosine Kinase Inhibitor, PD173074, Dovitinib"^^xsd:string . civic-kb:Status-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "5828"^^xsd:integer . civic-kb:Gene-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C25859 ; rdf:type uniprot:P22455 ; rdfs:label "FGFR4 Gene"^^xsd:string ; sio:hasValue "FGFR4"^^xsd:string . civic-kb:Variant-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "ERBB2-positive breast cancer cell lines including MDA-MB-361 and MDA-MB-453 were found to display outlier expression of FGFR4. Targeting FGFR4 in FGFR4 overexpressing ERBB2-positive breast cancer samples was found to confer independent as well as additive inhibitory effects upon their combined knockdown as well as pharmacological inhibition."^^xsd:string . civic-kb:Disease-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-a29fa6cc95bcd75adcf9b78fb7f8d065 . } civic-kb:provenance-a29fa6cc95bcd75adcf9b78fb7f8d065 { civic-kb:assertion-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 . civic-kb:Status-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-a29fa6cc95bcd75adcf9b78fb7f8d065 { civic-kb:nanoPub-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-a29fa6cc95bcd75adcf9b78fb7f8d065 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-5b62f6c3c86b6d8accbe0e7a200009c9 { civic-kb:nanoPub-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-5b62f6c3c86b6d8accbe0e7a200009c9 ; np:hasProvenance civic-kb:provenance-5b62f6c3c86b6d8accbe0e7a200009c9 ; np:hasPublicationInfo civic-kb:pubInfo-5b62f6c3c86b6d8accbe0e7a200009c9 . } civic-kb:assertion-5b62f6c3c86b6d8accbe0e7a200009c9 { civic-kb:Drugs-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdf:type dron:00018224 ; rdf:type db:DB01590 ; rdfs:label "Everolimus"^^xsd:string ; sio:hasValue "Everolimus"^^xsd:string . civic-kb:Status-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1296"^^xsd:integer . civic-kb:Gene-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C21220 ; rdf:type uniprot:P42336 ; rdfs:label "PIK3CA Gene"^^xsd:string ; sio:hasValue "PIK3CA"^^xsd:string . civic-kb:Variant-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18093 ; rdfs:label "Mutation"^^xsd:string ; sio:hasValue "MUTATION"^^xsd:string . civic-kb:Description-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "Archival tumor samples from 549 patients from the BOLERO-1 and -3 trials were analyzed for alterations in the PI3K pathway using next-generation sequencing, immunohistochemistry (IHC) and Sanger sequencing. In the BOLERO trials, patients with HER2-overexpressing advanced breast cancer were treated with trastuzumab, chemotherapy and randomized to receive either everolimus or placebo. In the pooled analysis of both trials, patients with PI3K mutations had longer progression-free survival with everolimus compared to placebo (HR 0.67 95%CI 0.45 to 1.00, P=0.05) whereas patients with PI3K wild type status did not benefit significantly (HR 1.1, 95%CI 0.83 to 1.46, P=0.5). The same was found when PI3K mutations, PTEN loss and AKT E17K mutations were combinedly analyzed as hyperactive PI3K pathway. Patients with PI3K hyperactive pathway had a hazard ratio of 0.67 (95%CI 0.48 to 0.93, P=0.02) compared to HR 1.19 (95%CI 0.87 to 1.62, P=0.28) in patients with PI3K normal pathway. These trends were independently confirmed in both trials but only pooled results showed consistent statistical significance."^^xsd:string . civic-kb:Disease-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-5b62f6c3c86b6d8accbe0e7a200009c9 . } civic-kb:provenance-5b62f6c3c86b6d8accbe0e7a200009c9 { civic-kb:assertion-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 . civic-kb:Status-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-5b62f6c3c86b6d8accbe0e7a200009c9 { civic-kb:nanoPub-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-5b62f6c3c86b6d8accbe0e7a200009c9 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-99d4ceb568802d914016b31d3c9b5a16 { civic-kb:nanoPub-99d4ceb568802d914016b31d3c9b5a16 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-99d4ceb568802d914016b31d3c9b5a16 ; np:hasProvenance civic-kb:provenance-99d4ceb568802d914016b31d3c9b5a16 ; np:hasPublicationInfo civic-kb:pubInfo-99d4ceb568802d914016b31d3c9b5a16 . } civic-kb:assertion-99d4ceb568802d914016b31d3c9b5a16 { civic-kb:Drugs-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-99d4ceb568802d914016b31d3c9b5a16 ; rdf:type dron:00013025 ; rdf:type db:DB0007 ; rdfs:label "Trastuzumab"^^xsd:string ; sio:hasValue "Trastuzumab"^^xsd:string . civic-kb:Status-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1384"^^xsd:integer . civic-kb:Gene-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C21220 ; rdf:type uniprot:P42336 ; rdfs:label "PIK3CA Gene"^^xsd:string ; sio:hasValue "PIK3CA"^^xsd:string . civic-kb:Variant-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18093 ; rdfs:label "Mutation"^^xsd:string ; sio:hasValue "MUTATION"^^xsd:string . civic-kb:Description-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "The HER2 overexpressing breast cancer cell line BT-474 transduced with mutant PIK3CA H1047R demonstrated essentially normal proliferation under trastuzumab, while control cells showed negligible proliferation with trastuzumab. Sequencing of 55 HER2 breast cancer samples revealed 25% PIK3CA mutation rate and Kaplan Meier curves showed decreased time to progression for mutant PIK3CA at borderline statistical significance (p=0.052). This was potentially explained by presence of PTEN loss in wild-type PIK3CA sample and combining PTEN loss with PIK3CA mutation resulted in significant differences in time to progression (p=0.007)."^^xsd:string . civic-kb:Disease-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-99d4ceb568802d914016b31d3c9b5a16 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-99d4ceb568802d914016b31d3c9b5a16 . } civic-kb:provenance-99d4ceb568802d914016b31d3c9b5a16 { civic-kb:assertion-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 . civic-kb:Status-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-99d4ceb568802d914016b31d3c9b5a16 { civic-kb:nanoPub-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-99d4ceb568802d914016b31d3c9b5a16 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-c72ec571d8e85aae381d94e4eeb1c57d { civic-kb:nanoPub-c72ec571d8e85aae381d94e4eeb1c57d rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-c72ec571d8e85aae381d94e4eeb1c57d ; np:hasProvenance civic-kb:provenance-c72ec571d8e85aae381d94e4eeb1c57d ; np:hasPublicationInfo civic-kb:pubInfo-c72ec571d8e85aae381d94e4eeb1c57d . } civic-kb:assertion-c72ec571d8e85aae381d94e4eeb1c57d { civic-kb:Drugs-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-c72ec571d8e85aae381d94e4eeb1c57d ; sio:hasValue "Carboplatin, Eribulin"^^xsd:string . civic-kb:Status-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "2969"^^xsd:integer . civic-kb:Gene-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C24284 ; rdf:type uniprot:P24941 ; rdfs:label "CDK2 Gene"^^xsd:string ; sio:hasValue "CDK2"^^xsd:string . civic-kb:Variant-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Cytoplasmic Expression"^^xsd:string ; sio:hasValue "CYTOPLASMIC EXPRESSION"^^xsd:string . civic-kb:Description-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a Phase 2 trial, HRD score, HR deficiency status, and cytoplasmic CDK2 predicted pathologic complete remission to neoadjuvant therapy with carboplatin and eribulin in early stage TNBC patients."^^xsd:string . civic-kb:Disease-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-c72ec571d8e85aae381d94e4eeb1c57d ; rdf:type efo:0005537 ; rdf:type ncit:C71428 ; rdf:type doid:60081 ; rdfs:label "Triple-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Triple-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-c72ec571d8e85aae381d94e4eeb1c57d . } civic-kb:provenance-c72ec571d8e85aae381d94e4eeb1c57d { civic-kb:assertion-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d . civic-kb:Status-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-c72ec571d8e85aae381d94e4eeb1c57d { civic-kb:nanoPub-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-c72ec571d8e85aae381d94e4eeb1c57d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-a37d3f28925ba968a59dd38d62622a9e { civic-kb:nanoPub-a37d3f28925ba968a59dd38d62622a9e rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-a37d3f28925ba968a59dd38d62622a9e ; np:hasProvenance civic-kb:provenance-a37d3f28925ba968a59dd38d62622a9e ; np:hasPublicationInfo civic-kb:pubInfo-a37d3f28925ba968a59dd38d62622a9e . } civic-kb:assertion-a37d3f28925ba968a59dd38d62622a9e { civic-kb:Drugs-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "AKT3 Inhibitor"^^xsd:string ; sio:hasValue "AKT3 Inhibitor"^^xsd:string . civic-kb:Status-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1923"^^xsd:integer . civic-kb:Gene-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C20937 ; rdf:type uniprot:Q9Y243 ; rdfs:label "AKT3 Gene"^^xsd:string ; sio:hasValue "AKT3"^^xsd:string . civic-kb:Variant-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "AKT3 was found to be preferentially required for the proliferation and tumor growth of TNBC. It was found to be upregulated in a set of TNBC cell lines compared to other breast cancer types. Depletion of AKT3 in TNBC sensitizes cells to the pan-Akt inhibitor GSK690693. It was found that depletion of Akt3 potentially inhibits the growth of TNBC cell lines in three-dimensional (3D) spheroid cultures and in mouse xenograft models, which imply that therapeutic targeting of AKT3 may provide a new treatment option for TNBCs."^^xsd:string . civic-kb:Disease-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-a37d3f28925ba968a59dd38d62622a9e ; rdf:type efo:0005537 ; rdf:type ncit:C71428 ; rdf:type doid:60081 ; rdfs:label "Triple-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Triple-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "E"^^xsd:string . civic-kb:Evidence_Type-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-a37d3f28925ba968a59dd38d62622a9e . } civic-kb:provenance-a37d3f28925ba968a59dd38d62622a9e { civic-kb:assertion-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e . civic-kb:Status-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-a37d3f28925ba968a59dd38d62622a9e { civic-kb:nanoPub-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-a37d3f28925ba968a59dd38d62622a9e prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-4f0514866dd37f223619edbe386aa3ff { civic-kb:nanoPub-4f0514866dd37f223619edbe386aa3ff rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-4f0514866dd37f223619edbe386aa3ff ; np:hasProvenance civic-kb:provenance-4f0514866dd37f223619edbe386aa3ff ; np:hasPublicationInfo civic-kb:pubInfo-4f0514866dd37f223619edbe386aa3ff . } civic-kb:assertion-4f0514866dd37f223619edbe386aa3ff { civic-kb:Drugs-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-4f0514866dd37f223619edbe386aa3ff ; rdf:type dron:00730818 ; rdf:type db:DB05773 ; rdfs:label "Ado-trastuzumab Emtansine"^^xsd:string ; sio:hasValue "Ado-trastuzumab Emtansine"^^xsd:string . civic-kb:Status-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "4840"^^xsd:integer . civic-kb:Gene-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "Trastuzumab emtansine has its indication for patients with HER2-positive metastatic breast cancer after therapy with Trastuzumab and Taxane, approval based on PFS and preliminary OS data. EMILIA was a randomised open-label, phase III study for patients with HER2-positive, unresectable, locally advanced, or metastatic breast cancer previously treated with Trastuzumab and a Taxane, randomized 1:1 to Trastuzumab-emtansine or Capecitabine plus Lapatinib. 991 patients were enrolled. Median OS was 29.9m vs. 25.9m. Fewer grade 3 or worse AE occurred with trastuzumab emtansine than with capecitabine plus lapatinib control treatment."^^xsd:string . civic-kb:Disease-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-4f0514866dd37f223619edbe386aa3ff ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-4f0514866dd37f223619edbe386aa3ff . } civic-kb:provenance-4f0514866dd37f223619edbe386aa3ff { civic-kb:assertion-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff . civic-kb:Status-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-4f0514866dd37f223619edbe386aa3ff { civic-kb:nanoPub-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-4f0514866dd37f223619edbe386aa3ff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-19de61082ce0e87490ed5d802e34f728 { civic-kb:nanoPub-19de61082ce0e87490ed5d802e34f728 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-19de61082ce0e87490ed5d802e34f728 ; np:hasProvenance civic-kb:provenance-19de61082ce0e87490ed5d802e34f728 ; np:hasPublicationInfo civic-kb:pubInfo-19de61082ce0e87490ed5d802e34f728 . } civic-kb:assertion-19de61082ce0e87490ed5d802e34f728 { civic-kb:Drugs-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-19de61082ce0e87490ed5d802e34f728 ; rdf:type db:DB08901 ; rdfs:label "Ponatinib"^^xsd:string ; sio:hasValue "Ponatinib"^^xsd:string . civic-kb:Status-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1767"^^xsd:integer . civic-kb:Gene-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C19929 ; rdf:type uniprot:P11362 ; rdfs:label "FGFR1 Gene"^^xsd:string ; sio:hasValue "FGFR1"^^xsd:string . civic-kb:Variant-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In MDA-MB-134 cells (ER-positive breast cancer cells with amplified FGFR1) ponatinib potently inhibited cell growth with a GI50 value of 23 nmol/L and inhibited FGFR1 phosphorylation with an IC50 value of 7 nmol/L."^^xsd:string . civic-kb:Disease-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-19de61082ce0e87490ed5d802e34f728 ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-19de61082ce0e87490ed5d802e34f728 . } civic-kb:provenance-19de61082ce0e87490ed5d802e34f728 { civic-kb:assertion-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 . civic-kb:Status-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-19de61082ce0e87490ed5d802e34f728 { civic-kb:nanoPub-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-19de61082ce0e87490ed5d802e34f728 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-e76c5cb591ee4be17df063c08196778d { civic-kb:nanoPub-e76c5cb591ee4be17df063c08196778d rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-e76c5cb591ee4be17df063c08196778d ; np:hasProvenance civic-kb:provenance-e76c5cb591ee4be17df063c08196778d ; np:hasPublicationInfo civic-kb:pubInfo-e76c5cb591ee4be17df063c08196778d . } civic-kb:assertion-e76c5cb591ee4be17df063c08196778d { civic-kb:Drugs-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e76c5cb591ee4be17df063c08196778d ; rdf:type db:DB09073 ; rdfs:label "Palbociclib"^^xsd:string ; sio:hasValue "Palbociclib (PD0332991)"^^xsd:string . civic-kb:Status-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1630"^^xsd:integer . civic-kb:Gene-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17360 ; rdf:type uniprot:P06400 ; rdfs:label "RB1 Gene"^^xsd:string ; sio:hasValue "RB1"^^xsd:string . civic-kb:Variant-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "M695FS*26"^^xsd:string ; sio:hasValue "M695FS*26"^^xsd:string . civic-kb:Description-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "Preclinical study in breast cancer cell lines treated with CDK4/6 inhibitor palbociclib. Palbociclib-resistant xenografts from one cell line (PDX244) were developed in-vivo. In resistant xenografts, western blot analysis showed a decrease of pRb protein levels in 4 of 7 CDK4/6-acquired resistant tumors and a sustained expression of the E2F target cyclin E2, in contrast to CDK4/6 inhibitor-sensitive PDX244. Genomic characterization of PDX244LR1 showed the acquisition of an RB1 frameshift mutation (RB1 p.M695fs*26)."^^xsd:string . civic-kb:Disease-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e76c5cb591ee4be17df063c08196778d ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-e76c5cb591ee4be17df063c08196778d ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-e76c5cb591ee4be17df063c08196778d rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-e76c5cb591ee4be17df063c08196778d . } civic-kb:provenance-e76c5cb591ee4be17df063c08196778d { civic-kb:assertion-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-e76c5cb591ee4be17df063c08196778d . civic-kb:Status-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-e76c5cb591ee4be17df063c08196778d { civic-kb:nanoPub-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-e76c5cb591ee4be17df063c08196778d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-790acd838ebb03d816ee9e9fb2e91726 { civic-kb:nanoPub-790acd838ebb03d816ee9e9fb2e91726 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-790acd838ebb03d816ee9e9fb2e91726 ; np:hasProvenance civic-kb:provenance-790acd838ebb03d816ee9e9fb2e91726 ; np:hasPublicationInfo civic-kb:pubInfo-790acd838ebb03d816ee9e9fb2e91726 . } civic-kb:assertion-790acd838ebb03d816ee9e9fb2e91726 { civic-kb:Drugs-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-790acd838ebb03d816ee9e9fb2e91726 ; rdf:type ncit:C1740 ; rdf:type chebi:50790 ; rdfs:label "Aromatase Inhibitor"^^xsd:string ; sio:hasValue "Aromatase Inhibitor"^^xsd:string . civic-kb:Status-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1727"^^xsd:integer . civic-kb:Gene-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C38349 ; rdf:type uniprot:P03372 ; rdfs:label "ESR1 Gene"^^xsd:string ; sio:hasValue "ESR1"^^xsd:string . civic-kb:Variant-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "S463P"^^xsd:string ; sio:hasValue "S463P"^^xsd:string . civic-kb:Description-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string . civic-kb:Disease-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-790acd838ebb03d816ee9e9fb2e91726 ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-790acd838ebb03d816ee9e9fb2e91726 . } civic-kb:provenance-790acd838ebb03d816ee9e9fb2e91726 { civic-kb:assertion-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 . civic-kb:Status-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-790acd838ebb03d816ee9e9fb2e91726 { civic-kb:nanoPub-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-790acd838ebb03d816ee9e9fb2e91726 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 { civic-kb:nanoPub-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; np:hasProvenance civic-kb:provenance-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; np:hasPublicationInfo civic-kb:pubInfo-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 . } civic-kb:assertion-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 { civic-kb:Drugs-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdf:type chebi:50914 ; rdfs:label "Tgx 221"^^xsd:string ; sio:hasValue "Tgx 221"^^xsd:string . civic-kb:Status-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1382"^^xsd:integer . civic-kb:Gene-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "Treatment of cells obtained from MMTV-NeuT mouse mammary tumors with the p110beta selective inhibitor TGX-221 showed significant but minimal reductions in lipid kinase activity and negligible reductions in phospho Akt levels. In simmilar cells subjected to p110alpha isoform knockout, TGX-221 treatment fully blocked Akt activation, indicating that TGX-221 was fully inhibiting the p110beta isoform. Athymic mice recieved MMTV-NeuT tumor cell transplants and were treated with TGX-221, which resulted in significant but minimal reduction in tumor growth compared to controls."^^xsd:string . civic-kb:Disease-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Does Not Support"^^xsd:string . civic-kb:Clinical_Significance-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 . } civic-kb:provenance-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 { civic-kb:assertion-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 . civic-kb:Status-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 { civic-kb:nanoPub-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-e2aba4b28f3cc9fbfbe9ddf07f3b95e0 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-a90daca011c2f1078e64357e8e8c62de { civic-kb:nanoPub-a90daca011c2f1078e64357e8e8c62de rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-a90daca011c2f1078e64357e8e8c62de ; np:hasProvenance civic-kb:provenance-a90daca011c2f1078e64357e8e8c62de ; np:hasPublicationInfo civic-kb:pubInfo-a90daca011c2f1078e64357e8e8c62de . } civic-kb:assertion-a90daca011c2f1078e64357e8e8c62de { civic-kb:Drugs-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-a90daca011c2f1078e64357e8e8c62de ; rdf:type dron:00730818 ; rdf:type db:DB05773 ; rdfs:label "Trastuzumab Emtansine"^^xsd:string ; sio:hasValue "Trastuzumab Emtansine"^^xsd:string . civic-kb:Status-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1432"^^xsd:integer . civic-kb:Gene-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a randomized phase II study, first line treatment of HER2-positive metastatic breast cancer with trastuzumab emtansine (T-DM1) resulted in improved progression free survival and fewer serious adverse effects when compared to treatment with combination trastuzumab plus docetaxel (HT) (median follow up 14 months, median PFS with T-DM1 14.2 vs 9.2 with HT)."^^xsd:string . civic-kb:Disease-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-a90daca011c2f1078e64357e8e8c62de ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-a90daca011c2f1078e64357e8e8c62de . } civic-kb:provenance-a90daca011c2f1078e64357e8e8c62de { civic-kb:assertion-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de . civic-kb:Status-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-a90daca011c2f1078e64357e8e8c62de { civic-kb:nanoPub-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-a90daca011c2f1078e64357e8e8c62de prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-6c91548cf187d736ab82a114374f7055 { civic-kb:nanoPub-6c91548cf187d736ab82a114374f7055 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-6c91548cf187d736ab82a114374f7055 ; np:hasProvenance civic-kb:provenance-6c91548cf187d736ab82a114374f7055 ; np:hasPublicationInfo civic-kb:pubInfo-6c91548cf187d736ab82a114374f7055 . } civic-kb:assertion-6c91548cf187d736ab82a114374f7055 { civic-kb:Drugs-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-6c91548cf187d736ab82a114374f7055 ; sio:hasValue "Afatinib, Lapatinib, Trastuzumab"^^xsd:string . civic-kb:Status-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "887"^^xsd:integer . civic-kb:Gene-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In this phase 2 trial, treatment-naive, ERBB2-positive (by IHC) breast cancer patients with stage IIIA, B, C or inflammatory disease were randomized 1:1:1 to afatinib (n = 10), lapatinib (n = 8), or trastuzumab (n = 11). The primary end point was objective response rate. Objective response was seen in 8 afatinib-, 6 lapatinib-, and 4 trastuzumab-treated patients. Afatinib demonstrated clinical activity that compared favorably to trastuzumab and lapatinib for neoadjuvant treatment of HER2-positive breast cancer."^^xsd:string . civic-kb:Disease-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-6c91548cf187d736ab82a114374f7055 ; rdf:type efo:0000305 ; rdf:type ncit:C4872 ; rdf:type doid:1612 ; rdfs:label "Breast Cancer"^^xsd:string ; sio:hasValue "Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-6c91548cf187d736ab82a114374f7055 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-6c91548cf187d736ab82a114374f7055 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-6c91548cf187d736ab82a114374f7055 . } civic-kb:provenance-6c91548cf187d736ab82a114374f7055 { civic-kb:assertion-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-6c91548cf187d736ab82a114374f7055 . civic-kb:Status-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-6c91548cf187d736ab82a114374f7055 { civic-kb:nanoPub-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-6c91548cf187d736ab82a114374f7055 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-0e8e5d59589de7d3825e38904f101449 { civic-kb:nanoPub-0e8e5d59589de7d3825e38904f101449 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-0e8e5d59589de7d3825e38904f101449 ; np:hasProvenance civic-kb:provenance-0e8e5d59589de7d3825e38904f101449 ; np:hasPublicationInfo civic-kb:pubInfo-0e8e5d59589de7d3825e38904f101449 . } civic-kb:assertion-0e8e5d59589de7d3825e38904f101449 { civic-kb:Drugs-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-0e8e5d59589de7d3825e38904f101449 ; sio:hasValue "Trastuzumab, Palbociclib (PD0332991)"^^xsd:string . civic-kb:Status-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1561"^^xsd:integer . civic-kb:Gene-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a panel of 47 breast cancer cell lines, HER2 overexpressing cells were among those more sensitive to CDK4/6 inhibitor Palbociclib (PD0332991). In the trastuzumab sensitive cell line Bt474, palbociclib synergized with trastuzumab in growth inhibition, while in 2 trastuzumab resistant cell lines, addition of trastuzumab to palbociclib treatment resulted in increased growth inhibition over palbociclib alone."^^xsd:string . civic-kb:Disease-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-0e8e5d59589de7d3825e38904f101449 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-0e8e5d59589de7d3825e38904f101449 . } civic-kb:provenance-0e8e5d59589de7d3825e38904f101449 { civic-kb:assertion-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 . civic-kb:Status-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-0e8e5d59589de7d3825e38904f101449 { civic-kb:nanoPub-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-0e8e5d59589de7d3825e38904f101449 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-847d5e9ff7867c88cf3dfdb483b7ffda { civic-kb:nanoPub-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-847d5e9ff7867c88cf3dfdb483b7ffda ; np:hasProvenance civic-kb:provenance-847d5e9ff7867c88cf3dfdb483b7ffda ; np:hasPublicationInfo civic-kb:pubInfo-847d5e9ff7867c88cf3dfdb483b7ffda . } civic-kb:assertion-847d5e9ff7867c88cf3dfdb483b7ffda { civic-kb:Drugs-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-847d5e9ff7867c88cf3dfdb483b7ffda ; rdf:type dron:00730818 ; rdf:type db:DB05773 ; rdfs:label "Trastuzumab Emtansine"^^xsd:string ; sio:hasValue "Trastuzumab Emtansine"^^xsd:string . civic-kb:Status-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1764"^^xsd:integer . civic-kb:Gene-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In the single arm Phase II study (TDM4258g) breast cancer patients who had progressed on previous anti-HER2 therapy were given transtuzumab emtansine (T-DM1), a HER2 monoclonal antibody and antimicrotubule drug conjugate. 95 trial participants with archival primary tumor were reassessed for HER2 status (positivity defined by FISH or IHC 3+), and 74 patients were confirmed for HER2 positivity and 21 were normal. Overall response rate was 33.8% (95% CI, 23.2% to 44.9%) in patients with confirmed HER2-positive tumors and 4.8% (95% CI, 1.0% to 21.8%) in HER2 normal patients. Median PFS was 8.2 months (95% CI, 4.4 months to not estimable) in patients with confirmed HER2-positive tumors and 2.6 months (95% CI, 1.4 to 3.9 months) in HER2 normal patients."^^xsd:string . civic-kb:Disease-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-847d5e9ff7867c88cf3dfdb483b7ffda ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-847d5e9ff7867c88cf3dfdb483b7ffda . } civic-kb:provenance-847d5e9ff7867c88cf3dfdb483b7ffda { civic-kb:assertion-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda . civic-kb:Status-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-847d5e9ff7867c88cf3dfdb483b7ffda { civic-kb:nanoPub-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-847d5e9ff7867c88cf3dfdb483b7ffda prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-f9337025873e0cc330ed5cbcb9906474 { civic-kb:nanoPub-f9337025873e0cc330ed5cbcb9906474 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-f9337025873e0cc330ed5cbcb9906474 ; np:hasProvenance civic-kb:provenance-f9337025873e0cc330ed5cbcb9906474 ; np:hasPublicationInfo civic-kb:pubInfo-f9337025873e0cc330ed5cbcb9906474 . } civic-kb:assertion-f9337025873e0cc330ed5cbcb9906474 { civic-kb:Drugs-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-f9337025873e0cc330ed5cbcb9906474 ; rdf:type dron:00013025 ; rdf:type db:DB0007 ; rdfs:label "Trastuzumab"^^xsd:string ; sio:hasValue "Trastuzumab"^^xsd:string . civic-kb:Status-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1122"^^xsd:integer . civic-kb:Gene-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "HERA was a Phase III trial assessing application of trastuzumab in an extended adjuvant setting. Patients were HER2 positive with completely excised invasive BC, node positive or negative, and having undergone prior adjuvant or neo-adjuvant chemotherapy. In the 3 arm study patients were given trastuzumab courses of 1 year, 2 years, or untreated. At the first planned interim analysis, trastuzumab treatment for one year was compared with observation alone. A significant difference in disease-free survival was seen with 220 DFS events out of 1693 in the observation arm versus 127 DFS events out of 1694 in the 1 year trastuzumab arm. 1 year adjuvant trastuzumab is currently the standard of care."^^xsd:string . civic-kb:Disease-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-f9337025873e0cc330ed5cbcb9906474 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "A"^^xsd:string . civic-kb:Evidence_Type-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-f9337025873e0cc330ed5cbcb9906474 . } civic-kb:provenance-f9337025873e0cc330ed5cbcb9906474 { civic-kb:assertion-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 . civic-kb:Status-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-f9337025873e0cc330ed5cbcb9906474 { civic-kb:nanoPub-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-f9337025873e0cc330ed5cbcb9906474 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-7667155189ffb3b53dfe1ee73e590998 { civic-kb:nanoPub-7667155189ffb3b53dfe1ee73e590998 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-7667155189ffb3b53dfe1ee73e590998 ; np:hasProvenance civic-kb:provenance-7667155189ffb3b53dfe1ee73e590998 ; np:hasPublicationInfo civic-kb:pubInfo-7667155189ffb3b53dfe1ee73e590998 . } civic-kb:assertion-7667155189ffb3b53dfe1ee73e590998 { civic-kb:Drugs-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-7667155189ffb3b53dfe1ee73e590998 ; rdf:type dron:00013025 ; rdf:type db:DB0007 ; rdfs:label "Trastuzumab"^^xsd:string ; sio:hasValue "Trastuzumab"^^xsd:string . civic-kb:Status-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "528"^^xsd:integer . civic-kb:Gene-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "A randomized clinical trial of 469 patients with previously untreated, HER2-positive, metastatic breast cancer demonstrated improved time to disease progression, objective response rate, and duration of response for patients who received trastuzumab in addition to chemotherapy compared to chemotherapy alone."^^xsd:string . civic-kb:Disease-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-7667155189ffb3b53dfe1ee73e590998 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "5"^^xsd:integer . civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-7667155189ffb3b53dfe1ee73e590998 . } civic-kb:provenance-7667155189ffb3b53dfe1ee73e590998 { civic-kb:assertion-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 . civic-kb:Status-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-7667155189ffb3b53dfe1ee73e590998 { civic-kb:nanoPub-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-7667155189ffb3b53dfe1ee73e590998 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; 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np:hasProvenance civic-kb:provenance-40344abcdd6cdd8615de4a954b2eb716 ; np:hasPublicationInfo civic-kb:pubInfo-40344abcdd6cdd8615de4a954b2eb716 . } civic-kb:assertion-40344abcdd6cdd8615de4a954b2eb716 { civic-kb:Drugs-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-40344abcdd6cdd8615de4a954b2eb716 ; rdf:type dron:00013025 ; rdf:type db:DB0007 ; rdfs:label "Trastuzumab"^^xsd:string ; sio:hasValue "Trastuzumab"^^xsd:string . civic-kb:Status-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "529"^^xsd:integer . civic-kb:Gene-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "A randomized clinical trial of 186 patients with previously untreated, HER2-positive, metastatic breast cancer demonstrated improved overall survival, response rate, response duration, time to progression, and time to treatment failure for patients who received trastuzumab in addition to chemotherapy (docetaxel) compared to chemotherapy alone."^^xsd:string . civic-kb:Disease-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-40344abcdd6cdd8615de4a954b2eb716 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "5"^^xsd:integer . civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-40344abcdd6cdd8615de4a954b2eb716 . } civic-kb:provenance-40344abcdd6cdd8615de4a954b2eb716 { civic-kb:assertion-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 . civic-kb:Status-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-40344abcdd6cdd8615de4a954b2eb716 { civic-kb:nanoPub-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-40344abcdd6cdd8615de4a954b2eb716 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-00506af562570bbb19597991ed8590fa { civic-kb:nanoPub-00506af562570bbb19597991ed8590fa rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-00506af562570bbb19597991ed8590fa ; np:hasProvenance civic-kb:provenance-00506af562570bbb19597991ed8590fa ; np:hasPublicationInfo civic-kb:pubInfo-00506af562570bbb19597991ed8590fa . } civic-kb:assertion-00506af562570bbb19597991ed8590fa { civic-kb:Drugs-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-00506af562570bbb19597991ed8590fa ; rdf:type chebi:49960 ; rdf:type db:DB05294 ; rdf:type db:DB08764 ; rdfs:label "Vandetanib"^^xsd:string ; sio:hasValue "Vandetanib"^^xsd:string . civic-kb:Status-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "2992"^^xsd:integer . civic-kb:Gene-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18539 ; rdf:type uniprot:P07949 ; rdfs:label "RET Gene"^^xsd:string ; sio:hasValue "RET"^^xsd:string . civic-kb:Variant-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "The activity of Vandetanib was tested in vivo in three PDX models of TNBC and one model of HER2+ BC with different expression levels of RET and EGFR. Vandetanib induced tumor regression in PDX models with high expression of RET or EGFR. The effect was associated with inhibition of RET/EGFR phosphorylation and MAP kinase pathway and increased necrosis. In a PDX model with no expression of RET nor EGFR, Vandetanib slowed tumor growth without inducing tumor regression. In addition, treatment by Vandetanib decreased expression of murine Vegf receptors and the endothelial marker Cd31 in the four PDX models tested, suggesting inhibition of tumor vascularization."^^xsd:string . civic-kb:Disease-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-00506af562570bbb19597991ed8590fa ; rdf:type efo:1000650 ; rdf:type doid:0060076 ; rdfs:label "Estrogen-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-00506af562570bbb19597991ed8590fa ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-00506af562570bbb19597991ed8590fa rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-00506af562570bbb19597991ed8590fa ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-00506af562570bbb19597991ed8590fa rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-00506af562570bbb19597991ed8590fa . } civic-kb:provenance-00506af562570bbb19597991ed8590fa { civic-kb:assertion-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-00506af562570bbb19597991ed8590fa . civic-kb:Status-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-00506af562570bbb19597991ed8590fa { civic-kb:nanoPub-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-00506af562570bbb19597991ed8590fa prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-62c33c14d1830da6a886e9d381dd5cff { civic-kb:nanoPub-62c33c14d1830da6a886e9d381dd5cff rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-62c33c14d1830da6a886e9d381dd5cff ; np:hasProvenance civic-kb:provenance-62c33c14d1830da6a886e9d381dd5cff ; np:hasPublicationInfo civic-kb:pubInfo-62c33c14d1830da6a886e9d381dd5cff . } civic-kb:assertion-62c33c14d1830da6a886e9d381dd5cff { civic-kb:Drugs-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-62c33c14d1830da6a886e9d381dd5cff ; sio:hasValue "Fulvestrant, Palbociclib (PD0332991)"^^xsd:string . civic-kb:Status-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1527"^^xsd:integer . civic-kb:Gene-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C97384 ; rdf:type uniprot:Q00534 ; rdfs:label "CDK6 Gene"^^xsd:string ; sio:hasValue "CDK6"^^xsd:string . civic-kb:Variant-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "Four fulvestrant (estrogen receptor degrader) resistant cell lines were derived from parent fulvestrant sensitive ER+ MCF-7/SO.5 breast cancer cell line. Derivative cell lines showed some sensitivity to CDK4/6 inhibitor palbociclib, and increased growth inhibition when treated with fulvestrant and palbociclib together."^^xsd:string . civic-kb:Disease-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-62c33c14d1830da6a886e9d381dd5cff ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-62c33c14d1830da6a886e9d381dd5cff . } civic-kb:provenance-62c33c14d1830da6a886e9d381dd5cff { civic-kb:assertion-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff . civic-kb:Status-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-62c33c14d1830da6a886e9d381dd5cff { civic-kb:nanoPub-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-62c33c14d1830da6a886e9d381dd5cff prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-68b01e3dc5951134a1998e6a32da18d7 { civic-kb:nanoPub-68b01e3dc5951134a1998e6a32da18d7 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-68b01e3dc5951134a1998e6a32da18d7 ; np:hasProvenance civic-kb:provenance-68b01e3dc5951134a1998e6a32da18d7 ; np:hasPublicationInfo civic-kb:pubInfo-68b01e3dc5951134a1998e6a32da18d7 . } civic-kb:assertion-68b01e3dc5951134a1998e6a32da18d7 { civic-kb:Drugs-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-68b01e3dc5951134a1998e6a32da18d7 ; rdf:type dron:00018972 ; rdf:type db:DB00947 ; rdfs:label "Fulvestrant"^^xsd:string ; sio:hasValue "Fulvestrant"^^xsd:string . civic-kb:Status-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1526"^^xsd:integer . civic-kb:Gene-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C97384 ; rdf:type uniprot:Q00534 ; rdfs:label "CDK6 Gene"^^xsd:string ; sio:hasValue "CDK6"^^xsd:string . civic-kb:Variant-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18211 ; rdfs:label "Overexpression"^^xsd:string ; sio:hasValue "OVEREXPRESSION"^^xsd:string . civic-kb:Description-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In two cohorts (n=45 and n=46) of ER+ breast cancer patients who had received fulvestrant, CDK6 overexpression correlated with shorter median time to progression in both cohorts (2.5 vs. 8.2 months and 3.4 vs. 8.9 months for CDK6 overexpression vs. normal expression). CDK6 expression did not correlate with other lines of treatment (N=68, tamoxifen or endocrine therapy). Four fulvestrant-resistant cell lines were derived from estrogen responsive and fulvestrant sensitive parental breast cancer cell line MCF-7/SO.5. Gene expression profiling showed upregulation of CDK6 in the fulvestrant resistant derivatives. Knockdown of CDK6 in these derivative cells resulted in fulvestrant sensitivity."^^xsd:string . civic-kb:Disease-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-68b01e3dc5951134a1998e6a32da18d7 ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-68b01e3dc5951134a1998e6a32da18d7 . } civic-kb:provenance-68b01e3dc5951134a1998e6a32da18d7 { civic-kb:assertion-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 . civic-kb:Status-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-68b01e3dc5951134a1998e6a32da18d7 { civic-kb:nanoPub-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-68b01e3dc5951134a1998e6a32da18d7 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-d409da7f061ef751522b2ba85ae1e5c1 { civic-kb:nanoPub-d409da7f061ef751522b2ba85ae1e5c1 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-d409da7f061ef751522b2ba85ae1e5c1 ; np:hasProvenance civic-kb:provenance-d409da7f061ef751522b2ba85ae1e5c1 ; np:hasPublicationInfo civic-kb:pubInfo-d409da7f061ef751522b2ba85ae1e5c1 . } civic-kb:assertion-d409da7f061ef751522b2ba85ae1e5c1 { civic-kb:Drugs-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-d409da7f061ef751522b2ba85ae1e5c1 ; rdf:type dron:00018921 ; rdf:type db:DB01259 ; rdfs:label "Lapatinib"^^xsd:string ; sio:hasValue "Lapatinib"^^xsd:string . civic-kb:Status-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "3052"^^xsd:integer . civic-kb:Gene-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Non-amplification"^^xsd:string ; sio:hasValue "NON-AMPLIFICATION"^^xsd:string . civic-kb:Description-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string . civic-kb:Disease-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-d409da7f061ef751522b2ba85ae1e5c1 ; rdf:type doid:0060080 ; rdfs:label "Her2-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-d409da7f061ef751522b2ba85ae1e5c1 . } civic-kb:provenance-d409da7f061ef751522b2ba85ae1e5c1 { civic-kb:assertion-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 . civic-kb:Status-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-d409da7f061ef751522b2ba85ae1e5c1 { civic-kb:nanoPub-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-d409da7f061ef751522b2ba85ae1e5c1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-e96185deedd330706810432a6325115a { civic-kb:nanoPub-e96185deedd330706810432a6325115a rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-e96185deedd330706810432a6325115a ; np:hasProvenance civic-kb:provenance-e96185deedd330706810432a6325115a ; np:hasPublicationInfo civic-kb:pubInfo-e96185deedd330706810432a6325115a . } civic-kb:assertion-e96185deedd330706810432a6325115a { civic-kb:Drugs-e96185deedd330706810432a6325115a rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e96185deedd330706810432a6325115a ; sio:hasValue "Trastuzumab, Lapatinib"^^xsd:string . civic-kb:Status-e96185deedd330706810432a6325115a rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-e96185deedd330706810432a6325115a rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1008"^^xsd:integer . civic-kb:Gene-e96185deedd330706810432a6325115a rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-e96185deedd330706810432a6325115a rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-e96185deedd330706810432a6325115a rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "This Phase III trial compared the activity of lapatinib vs. trastuzumab vs. sequential trastuzumab followed by lapatinib vs. lapatinib plus trastuzumab in an adjuvant treatment setting. 8381 women were randomized to one of four treatment arms. Patients had HER2 positive non-metastatic operable BC. The primary endpoint was disease free survival. First results report that after median 4.5 year follow up, a non significant 16% improvement in DFS was seen in trastuzumab + lapatinib vs. trastuzumab alone. The results are interpreted as showing no added benefit for labatinib addition to trastuzumab in the adjuvant treatment context. This trial is ongoing but not recruiting patients (NCT00490139)."^^xsd:string . civic-kb:Disease-e96185deedd330706810432a6325115a rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e96185deedd330706810432a6325115a ; rdf:type efo:0000305 ; rdf:type ncit:C4872 ; rdf:type doid:1612 ; rdfs:label "Breast Cancer"^^xsd:string ; sio:hasValue "Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-e96185deedd330706810432a6325115a rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-e96185deedd330706810432a6325115a rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-e96185deedd330706810432a6325115a rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Does Not Support"^^xsd:string . civic-kb:Clinical_Significance-e96185deedd330706810432a6325115a rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-e96185deedd330706810432a6325115a rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-e96185deedd330706810432a6325115a ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-e96185deedd330706810432a6325115a rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-e96185deedd330706810432a6325115a ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-e96185deedd330706810432a6325115a rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-e96185deedd330706810432a6325115a . } civic-kb:provenance-e96185deedd330706810432a6325115a { civic-kb:assertion-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-e96185deedd330706810432a6325115a . civic-kb:Status-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-e96185deedd330706810432a6325115a { civic-kb:nanoPub-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-e96185deedd330706810432a6325115a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-718faeb1f04ec43417a3768db942f609 { civic-kb:nanoPub-718faeb1f04ec43417a3768db942f609 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-718faeb1f04ec43417a3768db942f609 ; np:hasProvenance civic-kb:provenance-718faeb1f04ec43417a3768db942f609 ; np:hasPublicationInfo civic-kb:pubInfo-718faeb1f04ec43417a3768db942f609 . } civic-kb:assertion-718faeb1f04ec43417a3768db942f609 { civic-kb:Drugs-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-718faeb1f04ec43417a3768db942f609 ; sio:hasValue "Trastuzumab, XL147 (Pilaralisib)"^^xsd:string . civic-kb:Status-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1448"^^xsd:integer . civic-kb:Gene-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In 5 trastuzumab resistant HER2 overexpressing breast cancer cell lines, combination of the pan-PI3K inhibitor XL147 and trastuzumab treatment induced cell death to similar or greater levels than XL147 alone. In three trastuzumab resistant cell lines tested, colony formation in matrigel was markedly inhibited by combination treatment. Apoptotic markers were apparent with combination treatment. In athymic mice, trastuzumab resistant cell line HR6 was used in tumor xenografts and tumors were allowed to form. Mice subsequently treated with trastuzumab or XL147 showed continued tumor growth without marked difference from control, while combination treatment essentially halted tumor growth rate."^^xsd:string . civic-kb:Disease-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-718faeb1f04ec43417a3768db942f609 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-718faeb1f04ec43417a3768db942f609 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-718faeb1f04ec43417a3768db942f609 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-718faeb1f04ec43417a3768db942f609 . } civic-kb:provenance-718faeb1f04ec43417a3768db942f609 { civic-kb:assertion-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-718faeb1f04ec43417a3768db942f609 . civic-kb:Status-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-718faeb1f04ec43417a3768db942f609 { civic-kb:nanoPub-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-718faeb1f04ec43417a3768db942f609 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-f925694d5bc263de976b2dd16d1ca73d { civic-kb:nanoPub-f925694d5bc263de976b2dd16d1ca73d rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-f925694d5bc263de976b2dd16d1ca73d ; np:hasProvenance civic-kb:provenance-f925694d5bc263de976b2dd16d1ca73d ; np:hasPublicationInfo civic-kb:pubInfo-f925694d5bc263de976b2dd16d1ca73d . } civic-kb:assertion-f925694d5bc263de976b2dd16d1ca73d { civic-kb:Drugs-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-f925694d5bc263de976b2dd16d1ca73d ; rdf:type dron:00730843 ; rdf:type db:DB09074 ; rdfs:label "Olaparib"^^xsd:string ; sio:hasValue "Olaparib"^^xsd:string . civic-kb:Status-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "5816"^^xsd:integer . civic-kb:Gene-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18120 ; rdf:type uniprot:P51587 ; rdfs:label "BRCA2 Gene"^^xsd:string ; sio:hasValue "BRCA2"^^xsd:string . civic-kb:Variant-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Loss of Function"^^xsd:string ; sio:hasValue "LOSS-OF-FUNCTION"^^xsd:string . civic-kb:Description-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "302 patients (234 with progression events) with HER2-negative metastatic breast cancer and with a confirmed deleterious or suspected deleterious germline BRCA mutation (164 BRCA1, 129 BRCA2) had significantly improved progression-free survival and better response rate to olaparib (PARP inhibitor) than standard therapy (7.0 mo vs 4.2 mo, hazard ratio 0.58, 95% CI 0.43-0.8) in this randomized phase 3 trial (NCT02000622). For BRCA2 patients specifically, the hazard ratio was 0.68, 95% CI 0.45-0.1.07."^^xsd:string . civic-kb:Disease-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-f925694d5bc263de976b2dd16d1ca73d ; rdf:type doid:0060080 ; rdfs:label "Her2-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Germline Mutation"^^xsd:string . civic-kb:Trust_Rating-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-f925694d5bc263de976b2dd16d1ca73d . } civic-kb:provenance-f925694d5bc263de976b2dd16d1ca73d { civic-kb:assertion-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d . civic-kb:Status-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-f925694d5bc263de976b2dd16d1ca73d { civic-kb:nanoPub-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-f925694d5bc263de976b2dd16d1ca73d prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-8f83809a2cbb96d00d04869175ec71f1 { civic-kb:nanoPub-8f83809a2cbb96d00d04869175ec71f1 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-8f83809a2cbb96d00d04869175ec71f1 ; np:hasProvenance civic-kb:provenance-8f83809a2cbb96d00d04869175ec71f1 ; np:hasPublicationInfo civic-kb:pubInfo-8f83809a2cbb96d00d04869175ec71f1 . } civic-kb:assertion-8f83809a2cbb96d00d04869175ec71f1 { civic-kb:Drugs-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-8f83809a2cbb96d00d04869175ec71f1 ; rdf:type dron:00018921 ; rdf:type db:DB01259 ; rdfs:label "Lapatinib"^^xsd:string ; sio:hasValue "Lapatinib"^^xsd:string . civic-kb:Status-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "3052"^^xsd:integer . civic-kb:Gene-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Non-amplification"^^xsd:string ; sio:hasValue "NON-AMPLIFICATION"^^xsd:string . civic-kb:Description-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string . civic-kb:Disease-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-8f83809a2cbb96d00d04869175ec71f1 ; rdf:type doid:0060080 ; rdfs:label "Her2-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-8f83809a2cbb96d00d04869175ec71f1 . } civic-kb:provenance-8f83809a2cbb96d00d04869175ec71f1 { civic-kb:assertion-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 . civic-kb:Status-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-8f83809a2cbb96d00d04869175ec71f1 { civic-kb:nanoPub-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-8f83809a2cbb96d00d04869175ec71f1 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-47960bcc86cf902059e6a7330d4cd4f5 { civic-kb:nanoPub-47960bcc86cf902059e6a7330d4cd4f5 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-47960bcc86cf902059e6a7330d4cd4f5 ; np:hasProvenance civic-kb:provenance-47960bcc86cf902059e6a7330d4cd4f5 ; np:hasPublicationInfo civic-kb:pubInfo-47960bcc86cf902059e6a7330d4cd4f5 . } civic-kb:assertion-47960bcc86cf902059e6a7330d4cd4f5 { civic-kb:Drugs-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-47960bcc86cf902059e6a7330d4cd4f5 ; sio:hasValue "Trastuzumab, Lapatinib"^^xsd:string . civic-kb:Status-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1008"^^xsd:integer . civic-kb:Gene-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "This Phase III trial compared the activity of lapatinib vs. trastuzumab vs. sequential trastuzumab followed by lapatinib vs. lapatinib plus trastuzumab in an adjuvant treatment setting. 8381 women were randomized to one of four treatment arms. Patients had HER2 positive non-metastatic operable BC. The primary endpoint was disease free survival. First results report that after median 4.5 year follow up, a non significant 16% improvement in DFS was seen in trastuzumab + lapatinib vs. trastuzumab alone. The results are interpreted as showing no added benefit for labatinib addition to trastuzumab in the adjuvant treatment context. This trial is ongoing but not recruiting patients (NCT00490139)."^^xsd:string . civic-kb:Disease-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-47960bcc86cf902059e6a7330d4cd4f5 ; rdf:type efo:0000305 ; rdf:type ncit:C4872 ; rdf:type doid:1612 ; rdfs:label "Breast Cancer"^^xsd:string ; sio:hasValue "Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Does Not Support"^^xsd:string . civic-kb:Clinical_Significance-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-47960bcc86cf902059e6a7330d4cd4f5 . } civic-kb:provenance-47960bcc86cf902059e6a7330d4cd4f5 { civic-kb:assertion-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 . civic-kb:Status-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-47960bcc86cf902059e6a7330d4cd4f5 { civic-kb:nanoPub-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-47960bcc86cf902059e6a7330d4cd4f5 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-ba525e475aeaf55cb8ad15b76667e9a2 { civic-kb:nanoPub-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-ba525e475aeaf55cb8ad15b76667e9a2 ; np:hasProvenance civic-kb:provenance-ba525e475aeaf55cb8ad15b76667e9a2 ; np:hasPublicationInfo civic-kb:pubInfo-ba525e475aeaf55cb8ad15b76667e9a2 . } civic-kb:assertion-ba525e475aeaf55cb8ad15b76667e9a2 { civic-kb:Drugs-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-ba525e475aeaf55cb8ad15b76667e9a2 ; sio:hasValue "Trastuzumab, XL147 (Pilaralisib)"^^xsd:string . civic-kb:Status-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1448"^^xsd:integer . civic-kb:Gene-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In 5 trastuzumab resistant HER2 overexpressing breast cancer cell lines, combination of the pan-PI3K inhibitor XL147 and trastuzumab treatment induced cell death to similar or greater levels than XL147 alone. In three trastuzumab resistant cell lines tested, colony formation in matrigel was markedly inhibited by combination treatment. Apoptotic markers were apparent with combination treatment. In athymic mice, trastuzumab resistant cell line HR6 was used in tumor xenografts and tumors were allowed to form. Mice subsequently treated with trastuzumab or XL147 showed continued tumor growth without marked difference from control, while combination treatment essentially halted tumor growth rate."^^xsd:string . civic-kb:Disease-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-ba525e475aeaf55cb8ad15b76667e9a2 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-ba525e475aeaf55cb8ad15b76667e9a2 . } civic-kb:provenance-ba525e475aeaf55cb8ad15b76667e9a2 { civic-kb:assertion-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 . civic-kb:Status-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-ba525e475aeaf55cb8ad15b76667e9a2 { civic-kb:nanoPub-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-ba525e475aeaf55cb8ad15b76667e9a2 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-ed2a364a062f8d6f9ef41c8198434790 { civic-kb:nanoPub-ed2a364a062f8d6f9ef41c8198434790 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-ed2a364a062f8d6f9ef41c8198434790 ; np:hasProvenance civic-kb:provenance-ed2a364a062f8d6f9ef41c8198434790 ; np:hasPublicationInfo civic-kb:pubInfo-ed2a364a062f8d6f9ef41c8198434790 . } civic-kb:assertion-ed2a364a062f8d6f9ef41c8198434790 { civic-kb:Drugs-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-ed2a364a062f8d6f9ef41c8198434790 ; sio:hasValue "Trastuzumab, LY294002"^^xsd:string . civic-kb:Status-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1455"^^xsd:integer . civic-kb:Gene-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18256 ; rdf:type uniprot:P60484 ; rdfs:label "PTEN Gene"^^xsd:string ; sio:hasValue "PTEN"^^xsd:string . civic-kb:Variant-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Loss"^^xsd:string ; sio:hasValue "LOSS"^^xsd:string . civic-kb:Description-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "Knockdown of PTEN in trastuzumab sensitive HER2 breast cancer BT474 cells induced trastuzumab resistance. PTEN null cells treated with PI3K inhibitor LY294002 also did not show substantial inhibition, but co-treatment with trastuzumab and LY294002 induced growth inhibition comparable to trastuzumab alone in normal BT474 cells. BT474 mouse xenograft tumors were injected with PTEN antisense (AS) oligonucleotides and this resulted in trastuzumab resitance. Co-treatment of PTEN AS tumor mice with LY294002 and trastuzumab inhibited tumor growth in comparison to PTEN AS tumors treated with trastuzumab or LY294002 alone."^^xsd:string . civic-kb:Disease-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-ed2a364a062f8d6f9ef41c8198434790 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-ed2a364a062f8d6f9ef41c8198434790 . } civic-kb:provenance-ed2a364a062f8d6f9ef41c8198434790 { civic-kb:assertion-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 . civic-kb:Status-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-ed2a364a062f8d6f9ef41c8198434790 { civic-kb:nanoPub-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-ed2a364a062f8d6f9ef41c8198434790 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-e534046aade014e8733dc4a57bd401ae { civic-kb:nanoPub-e534046aade014e8733dc4a57bd401ae rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-e534046aade014e8733dc4a57bd401ae ; np:hasProvenance civic-kb:provenance-e534046aade014e8733dc4a57bd401ae ; np:hasPublicationInfo civic-kb:pubInfo-e534046aade014e8733dc4a57bd401ae . } civic-kb:assertion-e534046aade014e8733dc4a57bd401ae { civic-kb:Drugs-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e534046aade014e8733dc4a57bd401ae ; sio:hasValue "Cisplatin, Carboplatin"^^xsd:string . civic-kb:Status-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1684"^^xsd:integer . civic-kb:Gene-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17965 ; rdf:type uniprot:P38398 ; rdfs:label "BRCA1 Gene"^^xsd:string ; sio:hasValue "BRCA1"^^xsd:string . civic-kb:Variant-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18093 ; rdfs:label "Mutation"^^xsd:string ; sio:hasValue "MUTATION"^^xsd:string . civic-kb:Description-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In an evaluation of 77 patients, those who had BRCA1/2 germline mutations (n=11) had an increase response rate to cisplatin when compared to those without germline mutations (54.5% versus 19.7%; P=0.022) although progression free survival and overall survival was not significantly different."^^xsd:string . civic-kb:Disease-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-e534046aade014e8733dc4a57bd401ae ; rdf:type efo:0005537 ; rdf:type ncit:C71428 ; rdf:type doid:60081 ; rdfs:label "Triple-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Triple-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Germline Mutation"^^xsd:string . civic-kb:Trust_Rating-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-e534046aade014e8733dc4a57bd401ae ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-e534046aade014e8733dc4a57bd401ae rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-e534046aade014e8733dc4a57bd401ae . } civic-kb:provenance-e534046aade014e8733dc4a57bd401ae { civic-kb:assertion-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-e534046aade014e8733dc4a57bd401ae . civic-kb:Status-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-e534046aade014e8733dc4a57bd401ae { civic-kb:nanoPub-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-e534046aade014e8733dc4a57bd401ae prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-b3d194a0962ddb1250c9eca08c5b320a { civic-kb:nanoPub-b3d194a0962ddb1250c9eca08c5b320a rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-b3d194a0962ddb1250c9eca08c5b320a ; np:hasProvenance civic-kb:provenance-b3d194a0962ddb1250c9eca08c5b320a ; np:hasPublicationInfo civic-kb:pubInfo-b3d194a0962ddb1250c9eca08c5b320a . } civic-kb:assertion-b3d194a0962ddb1250c9eca08c5b320a { civic-kb:Drugs-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-b3d194a0962ddb1250c9eca08c5b320a ; rdf:type dron:00730843 ; rdf:type db:DB09074 ; rdfs:label "Olaparib"^^xsd:string ; sio:hasValue "Olaparib"^^xsd:string . civic-kb:Status-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1775"^^xsd:integer . civic-kb:Gene-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17965 ; rdf:type uniprot:P38398 ; rdfs:label "BRCA1 Gene"^^xsd:string ; sio:hasValue "BRCA1"^^xsd:string . civic-kb:Variant-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18093 ; rdfs:label "Mutation"^^xsd:string ; sio:hasValue "MUTATION"^^xsd:string . civic-kb:Description-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a study of 26 patients with breast cancer, 10 patients were BRCA-positive and 16 patients were BRCA-negative. Regardless of BRCA status, none showed objective response when treated with olaparib."^^xsd:string . civic-kb:Disease-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-b3d194a0962ddb1250c9eca08c5b320a ; rdf:type efo:0005537 ; rdf:type ncit:C71428 ; rdf:type doid:60081 ; rdfs:label "Triple-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Triple-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Germline Mutation"^^xsd:string . civic-kb:Trust_Rating-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-b3d194a0962ddb1250c9eca08c5b320a . } civic-kb:provenance-b3d194a0962ddb1250c9eca08c5b320a { civic-kb:assertion-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a . civic-kb:Status-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-b3d194a0962ddb1250c9eca08c5b320a { civic-kb:nanoPub-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-b3d194a0962ddb1250c9eca08c5b320a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-544e9a83ab1b34dac2bb21000aaefac6 { civic-kb:nanoPub-544e9a83ab1b34dac2bb21000aaefac6 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-544e9a83ab1b34dac2bb21000aaefac6 ; np:hasProvenance civic-kb:provenance-544e9a83ab1b34dac2bb21000aaefac6 ; np:hasPublicationInfo civic-kb:pubInfo-544e9a83ab1b34dac2bb21000aaefac6 . } civic-kb:assertion-544e9a83ab1b34dac2bb21000aaefac6 { civic-kb:Drugs-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-544e9a83ab1b34dac2bb21000aaefac6 ; sio:hasValue "Cisplatin, Carboplatin"^^xsd:string . civic-kb:Status-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1685"^^xsd:integer . civic-kb:Gene-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18120 ; rdf:type uniprot:P51587 ; rdfs:label "BRCA2 Gene"^^xsd:string ; sio:hasValue "BRCA2"^^xsd:string . civic-kb:Variant-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18093 ; rdfs:label "Mutation"^^xsd:string ; sio:hasValue "MUTATION"^^xsd:string . civic-kb:Description-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In an evaluation of 77 patients, those who had BRCA1/2 germline mutations (n=11) had an increase response rate to cisplatin when compared to those without germline mutations (54.5% versus 19.7%; P=0.022) although progression free survival and overall survival was not significantly different."^^xsd:string . civic-kb:Disease-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-544e9a83ab1b34dac2bb21000aaefac6 ; rdf:type efo:0005537 ; rdf:type ncit:C71428 ; rdf:type doid:60081 ; rdfs:label "Triple-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Triple-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Germline Mutation"^^xsd:string . civic-kb:Trust_Rating-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-544e9a83ab1b34dac2bb21000aaefac6 . } civic-kb:provenance-544e9a83ab1b34dac2bb21000aaefac6 { civic-kb:assertion-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 . civic-kb:Status-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-544e9a83ab1b34dac2bb21000aaefac6 { civic-kb:nanoPub-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-544e9a83ab1b34dac2bb21000aaefac6 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-830d708838f5ae804e949a73c380dc59 { civic-kb:nanoPub-830d708838f5ae804e949a73c380dc59 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-830d708838f5ae804e949a73c380dc59 ; np:hasProvenance civic-kb:provenance-830d708838f5ae804e949a73c380dc59 ; np:hasPublicationInfo civic-kb:pubInfo-830d708838f5ae804e949a73c380dc59 . } civic-kb:assertion-830d708838f5ae804e949a73c380dc59 { civic-kb:Drugs-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-830d708838f5ae804e949a73c380dc59 ; rdf:type dron:00730843 ; rdf:type db:DB09074 ; rdfs:label "Olaparib"^^xsd:string ; sio:hasValue "Olaparib"^^xsd:string . civic-kb:Status-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1776"^^xsd:integer . civic-kb:Gene-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18120 ; rdf:type uniprot:P51587 ; rdfs:label "BRCA2 Gene"^^xsd:string ; sio:hasValue "BRCA2"^^xsd:string . civic-kb:Variant-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C18093 ; rdfs:label "Mutation"^^xsd:string ; sio:hasValue "MUTATION"^^xsd:string . civic-kb:Description-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a study of 26 patients with breast cancer, 10 patients were BRCA-positive and 16 patients were BRCA-negative. Regardless of BRCA status, none showed objective response when treated with olaparib."^^xsd:string . civic-kb:Disease-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-830d708838f5ae804e949a73c380dc59 ; rdf:type efo:0005537 ; rdf:type ncit:C71428 ; rdf:type doid:60081 ; rdfs:label "Triple-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Triple-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Germline Mutation"^^xsd:string . civic-kb:Trust_Rating-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-830d708838f5ae804e949a73c380dc59 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-830d708838f5ae804e949a73c380dc59 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-830d708838f5ae804e949a73c380dc59 . } civic-kb:provenance-830d708838f5ae804e949a73c380dc59 { civic-kb:assertion-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-830d708838f5ae804e949a73c380dc59 . civic-kb:Status-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-830d708838f5ae804e949a73c380dc59 { civic-kb:nanoPub-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-830d708838f5ae804e949a73c380dc59 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-67c6ac2d1afd9d4c839ab8baced72904 { civic-kb:nanoPub-67c6ac2d1afd9d4c839ab8baced72904 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-67c6ac2d1afd9d4c839ab8baced72904 ; np:hasProvenance civic-kb:provenance-67c6ac2d1afd9d4c839ab8baced72904 ; np:hasPublicationInfo civic-kb:pubInfo-67c6ac2d1afd9d4c839ab8baced72904 . } civic-kb:assertion-67c6ac2d1afd9d4c839ab8baced72904 { civic-kb:Drugs-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-67c6ac2d1afd9d4c839ab8baced72904 ; rdf:type db:DB09073 ; rdfs:label "Palbociclib"^^xsd:string ; sio:hasValue "Palbociclib (PD0332991)"^^xsd:string . civic-kb:Status-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1629"^^xsd:integer . civic-kb:Gene-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C21412 ; rdf:type uniprot:P24864 ; rdfs:label "CCNE1 Gene"^^xsd:string ; sio:hasValue "CCNE1"^^xsd:string . civic-kb:Variant-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string . civic-kb:Disease-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-67c6ac2d1afd9d4c839ab8baced72904 ; rdf:type efo:1000649 ; rdf:type doid:0060075 ; rdfs:label "Estrogen-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Estrogen-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-67c6ac2d1afd9d4c839ab8baced72904 . } civic-kb:provenance-67c6ac2d1afd9d4c839ab8baced72904 { civic-kb:assertion-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 . civic-kb:Status-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-67c6ac2d1afd9d4c839ab8baced72904 { civic-kb:nanoPub-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-67c6ac2d1afd9d4c839ab8baced72904 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-4994a3764221b6e7d0c69e244c84fd7a { civic-kb:nanoPub-4994a3764221b6e7d0c69e244c84fd7a rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-4994a3764221b6e7d0c69e244c84fd7a ; np:hasProvenance civic-kb:provenance-4994a3764221b6e7d0c69e244c84fd7a ; np:hasPublicationInfo civic-kb:pubInfo-4994a3764221b6e7d0c69e244c84fd7a . } civic-kb:assertion-4994a3764221b6e7d0c69e244c84fd7a { civic-kb:Drugs-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-4994a3764221b6e7d0c69e244c84fd7a ; sio:hasValue "Trastuzumab, Trastuzumab Emtansine"^^xsd:string . civic-kb:Status-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "5817"^^xsd:integer . civic-kb:Gene-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "V777L"^^xsd:string ; sio:hasValue "V777L"^^xsd:string . civic-kb:Description-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a cohort of 205 Her2-receptor amplified breast cancers, 20 experienced recurrence after trastuzumab therapy. Of the 20 recurrent cases, only six patients had metastatic sites, excluding brain metastases, which were resistant to trastuzumab. NGS of thes six clinical specimens before and after trastuzumab therapy revealed one case of intrinsic activating mutation that leads to a valine-to-leucine substitution at codon 777 within the HER2 kinase domain (HER2 V777L)."^^xsd:string . civic-kb:Disease-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-4994a3764221b6e7d0c69e244c84fd7a ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "C"^^xsd:string . civic-kb:Evidence_Type-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Resistance or Non-Response"^^xsd:string . civic-kb:Variant_Origin-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-4994a3764221b6e7d0c69e244c84fd7a . } civic-kb:provenance-4994a3764221b6e7d0c69e244c84fd7a { civic-kb:assertion-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a . civic-kb:Status-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-4994a3764221b6e7d0c69e244c84fd7a { civic-kb:nanoPub-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-4994a3764221b6e7d0c69e244c84fd7a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-dc7b1a217ef35aba158b4e0cebf07179 { civic-kb:nanoPub-dc7b1a217ef35aba158b4e0cebf07179 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-dc7b1a217ef35aba158b4e0cebf07179 ; np:hasProvenance civic-kb:provenance-dc7b1a217ef35aba158b4e0cebf07179 ; np:hasPublicationInfo civic-kb:pubInfo-dc7b1a217ef35aba158b4e0cebf07179 . } civic-kb:assertion-dc7b1a217ef35aba158b4e0cebf07179 { civic-kb:Drugs-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-dc7b1a217ef35aba158b4e0cebf07179 ; rdf:type db:DB00997 ; rdfs:label "Doxorubicin"^^xsd:string ; sio:hasValue "Doxorubicin"^^xsd:string . civic-kb:Status-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "909"^^xsd:integer . civic-kb:Gene-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17801 ; rdf:type uniprot:P11388 ; rdfs:label "TOP2A Gene"^^xsd:string ; sio:hasValue "TOP2A"^^xsd:string . civic-kb:Variant-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C16608 ; rdfs:label "Expression"^^xsd:string ; sio:hasValue "EXPRESSION"^^xsd:string . civic-kb:Description-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In a retrospective study, TOP2A expression was assessed by IHC for 108 breast cancer patients (from TAX 303 trial). TOP2A expression was associated with a higher probability of response in doxorubicin treated but not in docetaxel treated breast cancer patients."^^xsd:string . civic-kb:Disease-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-dc7b1a217ef35aba158b4e0cebf07179 ; rdf:type efo:0000305 ; rdf:type ncit:C4872 ; rdf:type doid:1612 ; rdfs:label "Breast Cancer"^^xsd:string ; sio:hasValue "Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "2"^^xsd:integer . civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-dc7b1a217ef35aba158b4e0cebf07179 . } civic-kb:provenance-dc7b1a217ef35aba158b4e0cebf07179 { civic-kb:assertion-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 . civic-kb:Status-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-dc7b1a217ef35aba158b4e0cebf07179 { civic-kb:nanoPub-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-dc7b1a217ef35aba158b4e0cebf07179 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-1a5d993e22f1ee96a43c6f6363392a6a { civic-kb:nanoPub-1a5d993e22f1ee96a43c6f6363392a6a rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-1a5d993e22f1ee96a43c6f6363392a6a ; np:hasProvenance civic-kb:provenance-1a5d993e22f1ee96a43c6f6363392a6a ; np:hasPublicationInfo civic-kb:pubInfo-1a5d993e22f1ee96a43c6f6363392a6a . } civic-kb:assertion-1a5d993e22f1ee96a43c6f6363392a6a { civic-kb:Drugs-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-1a5d993e22f1ee96a43c6f6363392a6a ; sio:hasValue "Palbociclib (PD0332991), Letrozole"^^xsd:string . civic-kb:Status-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1765"^^xsd:integer . civic-kb:Gene-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18022 ; rdf:type uniprot:P42771 ; rdfs:label "CDKN2A Gene"^^xsd:string ; sio:hasValue "CDKN2A"^^xsd:string . civic-kb:Variant-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Loss"^^xsd:string ; sio:hasValue "LOSS"^^xsd:string . civic-kb:Description-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "A patient with metastatic ER-positive, her2-negative breast cancer with CDKN2A loss experienced a short-lived (~3-month) clinical response to palbociclib when given in combination with letrozole."^^xsd:string . civic-kb:Disease-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-1a5d993e22f1ee96a43c6f6363392a6a ; rdf:type doid:0060080 ; rdfs:label "Her2-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "C"^^xsd:string . civic-kb:Evidence_Type-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-1a5d993e22f1ee96a43c6f6363392a6a . } civic-kb:provenance-1a5d993e22f1ee96a43c6f6363392a6a { civic-kb:assertion-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a . civic-kb:Status-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-1a5d993e22f1ee96a43c6f6363392a6a { civic-kb:nanoPub-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-1a5d993e22f1ee96a43c6f6363392a6a prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-404be39b576364135de588d92d5ac67b { civic-kb:nanoPub-404be39b576364135de588d92d5ac67b rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-404be39b576364135de588d92d5ac67b ; np:hasProvenance civic-kb:provenance-404be39b576364135de588d92d5ac67b ; np:hasPublicationInfo civic-kb:pubInfo-404be39b576364135de588d92d5ac67b . } civic-kb:assertion-404be39b576364135de588d92d5ac67b { civic-kb:Drugs-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-404be39b576364135de588d92d5ac67b ; rdf:type dron:00730843 ; rdf:type db:DB09074 ; rdfs:label "Olaparib"^^xsd:string ; sio:hasValue "Olaparib"^^xsd:string . civic-kb:Status-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "5816"^^xsd:integer . civic-kb:Gene-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C18120 ; rdf:type uniprot:P51587 ; rdfs:label "BRCA2 Gene"^^xsd:string ; sio:hasValue "BRCA2"^^xsd:string . civic-kb:Variant-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Loss of Function"^^xsd:string ; sio:hasValue "LOSS-OF-FUNCTION"^^xsd:string . civic-kb:Description-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "302 patients (234 with progression events) with HER2-negative metastatic breast cancer and with a confirmed deleterious or suspected deleterious germline BRCA mutation (164 BRCA1, 129 BRCA2) had significantly improved progression-free survival and better response rate to olaparib (PARP inhibitor) than standard therapy (7.0 mo vs 4.2 mo, hazard ratio 0.58, 95% CI 0.43-0.8) in this randomized phase 3 trial (NCT02000622). For BRCA2 patients specifically, the hazard ratio was 0.68, 95% CI 0.45-0.1.07."^^xsd:string . civic-kb:Disease-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-404be39b576364135de588d92d5ac67b ; rdf:type doid:0060080 ; rdfs:label "Her2-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-404be39b576364135de588d92d5ac67b ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Germline Mutation"^^xsd:string . civic-kb:Trust_Rating-404be39b576364135de588d92d5ac67b rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-404be39b576364135de588d92d5ac67b ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-404be39b576364135de588d92d5ac67b rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-404be39b576364135de588d92d5ac67b . } civic-kb:provenance-404be39b576364135de588d92d5ac67b { civic-kb:assertion-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-404be39b576364135de588d92d5ac67b . civic-kb:Status-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-404be39b576364135de588d92d5ac67b { civic-kb:nanoPub-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-404be39b576364135de588d92d5ac67b prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-95e00edcde6727ca5a38c46ca58cb859 { civic-kb:nanoPub-95e00edcde6727ca5a38c46ca58cb859 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-95e00edcde6727ca5a38c46ca58cb859 ; np:hasProvenance civic-kb:provenance-95e00edcde6727ca5a38c46ca58cb859 ; np:hasPublicationInfo civic-kb:pubInfo-95e00edcde6727ca5a38c46ca58cb859 . } civic-kb:assertion-95e00edcde6727ca5a38c46ca58cb859 { civic-kb:Drugs-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-95e00edcde6727ca5a38c46ca58cb859 ; rdf:type dron:00018921 ; rdf:type db:DB01259 ; rdfs:label "Lapatinib"^^xsd:string ; sio:hasValue "Lapatinib"^^xsd:string . civic-kb:Status-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "submitted"^^xsd:string . civic-kb:Evidence_ID-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "3052"^^xsd:integer . civic-kb:Gene-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdfs:label "Non-amplification"^^xsd:string ; sio:hasValue "NON-AMPLIFICATION"^^xsd:string . civic-kb:Description-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string . civic-kb:Disease-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-95e00edcde6727ca5a38c46ca58cb859 ; rdf:type doid:0060080 ; rdfs:label "Her2-receptor Negative Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Negative Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Supports"^^xsd:string . civic-kb:Clinical_Significance-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string . civic-kb:Trust_Rating-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "3"^^xsd:integer . civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-95e00edcde6727ca5a38c46ca58cb859 . } civic-kb:provenance-95e00edcde6727ca5a38c46ca58cb859 { civic-kb:assertion-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 . civic-kb:Status-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-95e00edcde6727ca5a38c46ca58cb859 { civic-kb:nanoPub-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-95e00edcde6727ca5a38c46ca58cb859 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-d29a96a9b9e3b29ae8f18f38ae0ca249 { civic-kb:nanoPub-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-d29a96a9b9e3b29ae8f18f38ae0ca249 ; np:hasProvenance civic-kb:provenance-d29a96a9b9e3b29ae8f18f38ae0ca249 ; np:hasPublicationInfo civic-kb:pubInfo-d29a96a9b9e3b29ae8f18f38ae0ca249 . } civic-kb:assertion-d29a96a9b9e3b29ae8f18f38ae0ca249 { civic-kb:Drugs-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-d29a96a9b9e3b29ae8f18f38ae0ca249 ; sio:hasValue "Trastuzumab, Lapatinib"^^xsd:string . civic-kb:Status-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1008"^^xsd:integer . civic-kb:Gene-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "This Phase III trial compared the activity of lapatinib vs. trastuzumab vs. sequential trastuzumab followed by lapatinib vs. lapatinib plus trastuzumab in an adjuvant treatment setting. 8381 women were randomized to one of four treatment arms. Patients had HER2 positive non-metastatic operable BC. The primary endpoint was disease free survival. First results report that after median 4.5 year follow up, a non significant 16% improvement in DFS was seen in trastuzumab + lapatinib vs. trastuzumab alone. The results are interpreted as showing no added benefit for labatinib addition to trastuzumab in the adjuvant treatment context. This trial is ongoing but not recruiting patients (NCT00490139)."^^xsd:string . civic-kb:Disease-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdf:type efo:0000305 ; rdf:type ncit:C4872 ; rdf:type doid:1612 ; rdfs:label "Breast Cancer"^^xsd:string ; sio:hasValue "Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "B"^^xsd:string . civic-kb:Evidence_Type-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Evidence_Type ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Evidence Type"^^xsd:string ; rdfs:comment "Evidence Type"^^xsd:string ; sio:hasValue "Predictive"^^xsd:string . civic-kb:Evidence_Direction-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Evidence_Direction ; rdf:type sio:Attribute ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Evidence Direction"^^xsd:string ; rdfs:comment "Evidence Direction"^^xsd:string ; sio:hasValue "Does Not Support"^^xsd:string . civic-kb:Clinical_Significance-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Clinical_Significance ; rdf:type sio:Attribute ; rdfs:label "Clinical Significance"^^xsd:string ; rdfs:comment "Clinical Significance"^^xsd:string ; sio:hasValue "Sensitivity"^^xsd:string . civic-kb:Variant_Origin-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Variant_Origin ; rdf:type ncit:C42703 ; sio:isAttributeOf civic-kb:Variant-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Variant Origin"^^xsd:string ; rdfs:comment "Variant Origin"^^xsd:string ; sio:hasValue "Somatic Mutation"^^xsd:string . civic-kb:Trust_Rating-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:Trust_Rating ; rdf:type ncit:C77538 ; sio:isAttributeOf civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 ; rdfs:label "Trust Rating"^^xsd:string ; rdfs:comment "Trust Rating"^^xsd:string ; sio:hasValue "4"^^xsd:integer . civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 rdf:type civic-kb:evidence; rdf:type ncit:C43583; sio:hasIdentifier civic-kb:Evidence_ID-d29a96a9b9e3b29ae8f18f38ae0ca249 . } civic-kb:provenance-d29a96a9b9e3b29ae8f18f38ae0ca249 { civic-kb:assertion-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; prov:wasDerivedFrom civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 . civic-kb:Status-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_ID-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Gene-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Description-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Disease-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Level-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Type-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Evidence_Direction-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Clinical_Significance-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Variant_Origin-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Trust_Rating-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:evidence-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . } civic-kb:pubInfo-d29a96a9b9e3b29ae8f18f38ae0ca249 { civic-kb:nanoPub-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime . civic-kb:Drugs-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "1"^^xsd:integer . civic-kb:Status-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "2"^^xsd:integer . civic-kb:Evidence_ID-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "3"^^xsd:integer . civic-kb:Gene-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "4"^^xsd:integer . civic-kb:Variant-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "5"^^xsd:integer . civic-kb:Description-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "6"^^xsd:integer . civic-kb:Disease-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "7"^^xsd:integer . civic-kb:Evidence_Level-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "8"^^xsd:integer . civic-kb:Evidence_Type-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "9"^^xsd:integer . civic-kb:Evidence_Direction-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "10"^^xsd:integer . civic-kb:Clinical_Significance-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "11"^^xsd:integer . civic-kb:Variant_Origin-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "12"^^xsd:integer . civic-kb:Trust_Rating-d29a96a9b9e3b29ae8f18f38ae0ca249 prov:generatedAtTime "2018-03-05T19:54:48Z"^^xsd:dateTime ; hasco:hasPosition "13"^^xsd:integer . } civic-kb:head-256018214dd777f21fd2aa2bccd02c81 { civic-kb:nanoPub-256018214dd777f21fd2aa2bccd02c81 rdf:type np:Nanopublication ; np:hasAssertion civic-kb:assertion-256018214dd777f21fd2aa2bccd02c81 ; np:hasProvenance civic-kb:provenance-256018214dd777f21fd2aa2bccd02c81 ; np:hasPublicationInfo civic-kb:pubInfo-256018214dd777f21fd2aa2bccd02c81 . } civic-kb:assertion-256018214dd777f21fd2aa2bccd02c81 { civic-kb:Drugs-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Drugs ; rdf:type sio:Drug ; rdfs:label "Drugs"^^xsd:string ; rdfs:comment "Drugs"^^xsd:string ; sio:inRelationTo civic-kb:Gene-256018214dd777f21fd2aa2bccd02c81 ; sio:hasValue "Trastuzumab, XL147 (Pilaralisib)"^^xsd:string . civic-kb:Status-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Status ; rdf:type sio:StatusDescriptor ; sio:isAttributeOf civic-kb:evidence-256018214dd777f21fd2aa2bccd02c81 ; rdfs:label "Status"^^xsd:string ; rdfs:comment "Status"^^xsd:string ; sio:hasValue "accepted"^^xsd:string . civic-kb:Evidence_ID-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Evidence_ID ; rdf:type sio:Identifier ; sio:isAttributeOf civic-kb:evidence-256018214dd777f21fd2aa2bccd02c81 ; rdfs:label "Evidence ID"^^xsd:string ; rdfs:comment "Evidence ID"^^xsd:string ; sio:hasValue "1448"^^xsd:integer . civic-kb:Gene-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Gene ; rdf:type sio:Gene ; rdfs:label "Gene"^^xsd:string ; rdfs:comment "Gene"^^xsd:string ; rdf:type ncit:C17756 ; rdf:type uniprot:P04626 ; rdfs:label "ERBB2 Gene"^^xsd:string ; sio:hasValue "ERBB2"^^xsd:string . civic-kb:Variant-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Variant ; rdf:type ncit:C97927 ; rdfs:label "Variant"^^xsd:string ; rdfs:comment "Variant"^^xsd:string ; sio:hasRole [ rdf:type sio:VariantRole ; sio:inRelationTo civic-kb:Gene ] ; rdf:type ncit:C45581 ; rdfs:label "Amplification"^^xsd:string ; sio:hasValue "AMPLIFICATION"^^xsd:string . civic-kb:Description-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Description ; rdf:type sio:Description ; sio:isAttributeOf civic-kb:evidence-256018214dd777f21fd2aa2bccd02c81 ; rdfs:label "Description"^^xsd:string ; rdfs:comment "Description"^^xsd:string ; sio:hasValue "In 5 trastuzumab resistant HER2 overexpressing breast cancer cell lines, combination of the pan-PI3K inhibitor XL147 and trastuzumab treatment induced cell death to similar or greater levels than XL147 alone. In three trastuzumab resistant cell lines tested, colony formation in matrigel was markedly inhibited by combination treatment. Apoptotic markers were apparent with combination treatment. In athymic mice, trastuzumab resistant cell line HR6 was used in tumor xenografts and tumors were allowed to form. Mice subsequently treated with trastuzumab or XL147 showed continued tumor growth without marked difference from control, while combination treatment essentially halted tumor growth rate."^^xsd:string . civic-kb:Disease-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Disease ; rdf:type sio:Disease ; rdfs:label "Disease"^^xsd:string ; rdfs:comment "Disease"^^xsd:string ; sio:inRelationTo civic-kb:Gene-256018214dd777f21fd2aa2bccd02c81 ; rdf:type efo:1000294 ; rdf:type ncit:C53556 ; rdf:type doid:0060079 ; rdfs:label "Her2-receptor Positive Breast Cancer"^^xsd:string ; sio:hasValue "Her2-receptor Positive Breast Cancer"^^xsd:string . civic-kb:Evidence_Level-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Evidence_Level ; rdf:type ncit:C25554 ; sio:isAttributeOf civic-kb:evidence-256018214dd777f21fd2aa2bccd02c81 ; rdfs:label "Evidence Level"^^xsd:string ; rdfs:comment "Evidence Level"^^xsd:string ; sio:hasValue "D"^^xsd:string . civic-kb:Evidence_Type-256018214dd777f21fd2aa2bccd02c81 rdf:type civic-kb:Evidence_Type ; 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